Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MFFSKD--EKNPIKRALQGELLQ--NEPFIQLCTKI-ENYLMDTEAVNEQLIELNEQLTMRLKEKGL-KP--------GEKGATKQLRTL-IQEILTEAGFREGMLQTIGNKPLKKEDFMFLVSSGF---MLKDSSLRASSHGEL----------------THAIQWCLIILKQKKDSSFLE---NIP-----TSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSRS---PEWLSDHIQNDEDQIFPV-LREVIKNRTEKGKTE-------ENKGKLQKKLENPPEHY--EKHEEIENILMPKPK |
| 1MLA Chain:? ((3-307)) | QFAFVFPGQGSQTVGML--ADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEA----VPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVP-----VVNNVDVKCETNGDAIRDALVRQLYN------PVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPSAMAAAL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2740 for 1632 contacts (1.7/contact) +
2D Compatibility (PS) -25483 + (NN) -15204 + (LL) 560
1D Compatibility (HY) -2400 + (ID) 1800
Total energy: -41587.0 ( -25.48 by residue)
QMean score : 0.381
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