Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILY-QRA-DNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWL-------------PHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT---SSPVNGAFLSWQNLWHGYGNS-Q-AYALLVAGNRLGDRDMIKAAFN----ELDHFHPWLISN--GLLNEFTVRQQGEKVTLIEQKKFSQIAY-IIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAEST---IEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 3WKG Chain:A ((34-401)) | -----------------------------------RTHDPVHGGF-VG-RVGPDGRPHPEAPRG---AILNARILWTFAAAYRQLGTPLYREMAERAYRYFVRHFVDAEHGGVYWMVAADGRPLDT-----RKHVYAQSFAIYALSEWHRATG--GEAALALARSIYDLIETHCADRV-----HGGYVEACDRAWRPLEDARLSAKDAPEPRSMNTHLHVLEAYANLYRVWPETELAARLQALIELFLRAIYHPATGHLILFFDERWRPRSRAVSFGHDIEASWLLLEAVDVLGQATLRPRVQQASLHLARATLAEGRAPDGSLYYEIG--EQG------H--LDTDRHWWPQAEALVGFLNAYQESGEVLFYEAAEDVWRYIR------ERQRDTRGGEWFARVR-DDGAPY-PDDKVDFWKGPYHNGRACLEAIQR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111677 for 2868 contacts (-38.9/contact) +
2D Compatibility (PS) -36025 + (NN) -19327 + (LL) 7412
1D Compatibility (HY) 3600 + (ID) 2150
Total energy: -158167.0 ( -55.15 by residue)
QMean score : 0.337
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