Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
1JBE Chain:A ((6-47))
----------------------------------------------------------KFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYG------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JBE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13346 for 228 contacts (-58.5/contact) +
2D Compatibility (PS) -4514 + (NN) -3207 + (LL) 6124
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -16893.0 ( -74.09 by residue)
QMean score : 0.038
(partial model without unconserved sides chains):
PDB file :
Tito_1JBE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JBE-query.scw
PDB file :
Tito_Scwrl_1JBE.pdb
: