Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVLLLVFLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEEDTE-----------ET------FLLN-NSRFYI-TIQSLDSDGMTKSDLKSVLK--DYANDDGVKD-QSAVQEFELPQFFGTYLKGSCET-----DHCLYACLMTKAAGSGFYISIIYSKENENIAEKILKSFTMEE-
1EXQ Chain:A ((1-154))
----------------SS-----PGIWQLDCTHLEG-KVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTGATVRAACDWAGIKQEDGIPYVESMNKE--LKKIIGQV-RDQAEHLKTAVQMAVFIHNKKRKGGIGGY----------SAGERIVDIIATDIQ
General information:
TITO was launched using:
RESULT:
Template:
1EXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39292 for 707 contacts (-55.6/contact) +
2D Compatibility (PS) -12521 + (NN) -7114 + (LL) 3948
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -60829.0 ( -86.04 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1EXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EXQ-query.scw
PDB file :
Tito_Scwrl_1EXQ.pdb
: