Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPI--LADEVQTFKALITIHKVLQEGHP--VTLREA-MANRGWIDSLSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITI-PKL----- |
| 4I17 Chain:A ((4-226)) | ---TTDPNQLKNEGNDALN------AKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKA--VPGNATIEKLYAIYYLKEGQKFQQAGN---------------IEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPL-----------------------ASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36149 for 1629 contacts (-22.2/contact) +
2D Compatibility (PS) -22178 + (NN) -3470 + (LL) 4088
1D Compatibility (HY) 1200 + (ID) 1900
Total energy: -58409.0 ( -35.86 by residue)
QMean score : 0.246
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