Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCIIKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILN-EQYGLVT---GDGIRRIDLKSLNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDII-----QKQKINFVLAKDGNVYTLESA---------DNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGMVASETENIIYLVST-DGAIYKYILG--DSDSLK-APFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKD-GKVLHTVDCGESVPSQILFNN |
| 3G4E Chain:A ((14-249)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM-DAPVSSVALRQSGGYVAT----IGTKFCALNWKEQS---------AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV---------DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACY----NGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92184 for 1722 contacts (-53.5/contact) +
2D Compatibility (PS) -23110 + (NN) -4892 + (LL) 11688
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -117498.0 ( -68.23 by residue)
QMean score : 0.153
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