Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHFISPQKIVPLSYNEFIRKVVSDHSIQEQEKEIRRLSQIVFGNQN--------QLANQLSQIHENPSF---TKIISNTLTNSPESFAKLAGSKTFGIKNSKRKQAEKNISKLVEAIHKYADAVENSMGNIIKNHNAEQKRLAQSVELPSD
2QSB Chain:A ((17-88))
---------------------YLLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNVPAHGRTDLYTIISKLEAL----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12219 for 393 contacts (-31.1/contact) +
2D Compatibility (PS) -6561 + (NN) -4073 + (LL) 5672
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -19931.0 ( -50.72 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_2QSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QSB-query.scw
PDB file :
Tito_Scwrl_2QSB.pdb
: