Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVL-KVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSDTDPEDYSEKLQGSTINADKSVEGNLF--FVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIE-DKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE--------- |
| 2ZKT Chain:A ((1-412)) | MVLKRKGLLIILDGLGDRPIKELNGLTPLEY--ANTPNMDKLAEIGILGQQDPIKPGQPAGSDTAHLSIFGYDPYETYRGRGFFEALGVGLDLSKDDLAFRVNFATLEEEAHERAIQEEVDIGVDFIFKGLVLKGMSKVGDNDLIRGAGTYPNIPMKFTEQWKVKAAGVIA---VALVKGVARAVGFDVYTPEGATGEYNT---------NEMAKAKKAVELLKDYDFVFLHFKPTDAAGH--------DNKPKLKAELIERADRMIGYILDHVDLEEVVIAITGDHSTPCEVMNHSGDPVPLLIAGGGVRTDDTKRFGEREAMKG---------------GLGRIRGHDIVPIMMDLMNRSEKFGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZKT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 139180 for 2828 contacts (49.2/contact) +
2D Compatibility (PS) -32338 + (NN) 4012 + (LL) 2300
1D Compatibility (HY) -4000 + (ID) 2200
Total energy: 106954.0 ( 37.82 by residue)
QMean score : -0.002
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