Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MAGHTQQPSGRGNPRPAPSPSPVPGTVPGASERVALKKEIGLLSACTIIIGNIIGSGIFISPKGVLEHSGSVGLALFVWVLGGGVTALGSLCYAELGVAIPKSGGDYAYVTEIFGG-LAGFLLLWSAVLIMYPTSLAVI----SMTFSNYVLQPVFPN--CIPPTTASRVLSMACLMLLTWVNSSSVRWAT---RIQDM----FTGGKLLALSLIIGVGLLQI----FQGHF-EELRPSNAFAFWMT-------PSVGHLALAFLQGSFAFSGWNFLNYVT-------EEMVDARKNLPRAIFISIPLVTFVYTFTNI---------AYFTAMSPQELLS----SNAVAVTFGEKLLG-YFS--------------------WVMPVSVAL--STFGGINGYLFTYSRLCFSGAREGHLPSLLAMIHVRHC--TPIPALLVCCGATAVI----------------------MLVGDTYTLI-----NYVSFINYLCYGVTILGLLLLRWRRPALHRPIKVNLLIPVAYLVFWAFLL--------------------------------VFSFISEPMVCGVGVIIILT---GVP-IFFLGVFWRSKPKCVHRLTESMTHWGQELCFVV----YPQDA-PEEEENGPCPPSLLPATDKPSKPQ-- |
| 4UIR Chain:A ((2-646)) | NPITSKFDKVLNASSEYGHVNHEPDSSKEQQRNT-PQKSMPFS------------------DQIGNYQRNKGIPVQSYDNSK---IYIIGSGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGGSLDG---------AGNPTDGYIIRGGREMDMTYENLWDMFQDIPALEMPAPYSVLDEYRLINDNDSNYSKARLINNKGEIKDFSKFGLNKMDQLAIIRLLLKNKEELDDLTIEDYFSESFLKSNFWTFWRTMFAFENWHSLLELKLYMHRFLHAIDGLNDLSSLVFPKYNQYDTFVTPLRKFLQEKGVNIHLNTLVKDLDIHINTEGKVVEGIITEQDGKEVKIPVGKNDYVIVTTGSMTEDTFYGNNKTAPIIGIDNSTSGQSAGWKLWKNLAAKSEIFGKPEKFCSNIEKSAWESATLTCKPSALIDKLKEYSVNDPYSGKTVTGGIITITDSNWLMSFTCNRQPHFPEQPDDVLVLWVYALFMDKEGNYIKKTMLECTGDEILAELCYHLGIEDQLENVQKNTIVRTAFMPYITSMFMPRAKGDRPRVVPEGCKNLGLVGQFVETNNDVVFTMESSVRTARIAVYKLLNLNKQVPDINPLQYDIRHLLKAAKTLNDDKPFVGEGLLRKVLKGTYFEHVLPAGEEHESFIAEHVNKFREWVKGIRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -340228 for 3581 contacts (-95.0/contact) +
2D Compatibility (PS) -51610 + (NN) -10741 + (LL) 3524
1D Compatibility (HY) -12800 + (ID) 5250
Total energy: -417105.0 ( -116.48 by residue)
QMean score : 0.150
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