Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQGIPLGLA-GSIPLILQSK-NVSYTDQAF-FSFVFWPFSL-KLLWAPLVDAVYVKNFGRRKSWLVP--TQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLF----EFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEE---TQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVE----EGVPKEHLALLAVPMVPLQI----ILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLL-NTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN |
| 2CFQ Chain:A ((8-379)) | -------------------------------------------------------------------------NFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-----GLRKYLLWIITGMLVMFAPFFIFIFGP-----------LLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSR--RSNFEFGRARMFGCVGWALGASIVGIMFT-----------------INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGK-N---ALL---LAGTIMSVRIIGSSF-AT------S-AL----EVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245965 for 2798 contacts (-87.9/contact) +
2D Compatibility (PS) -34888 + (NN) -1176 + (LL) 5600
1D Compatibility (HY) -26400 + (ID) 2250
Total energy: -305079.0 ( -109.03 by residue)
QMean score : 0.232
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