Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAAATAAAALAAADPPPAMPQAAGAGGPTTRRDF--YWLRSF-----LAGGIAGCCAKTTVAPLDRVKV----LLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPY-GAIQFMAFEHYKTLITTKLGISGHVHRLMAG-SMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKT-IYAKEGGFF-GFYRGLM-PTILGMAPYAGVSFFTFG---TLKSVGLSHAPTLLGRP-SSDNPNVLVLKTHVNLL-CGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLT-MRDTMKYVYGHHGIRKGLYRGLSLNYIRC-IPSQAVAFTTYELMKQFFHLN-- |
| 4US5 Chain:A ((4-338)) | HVKLSVVEQAPVVEGLTPAHSLQHSIELARLADRLGYERFWVAEHHAEIFNAVPAPEILIARIAAETSGIRVGSGGVLLSLYSPLKVAEVFRTLHALYPDRIDLGIGRANRVKLPVFAALRDDSSDDLWRRLEQLRAYLDPDSGLPFTVSPRMPGGPALWLLGA---SVSSAEAAARL-------GLPYAYAHFITPQFTREAMDTYRAAFVPGPDTPSPRPILSVVVCCAETDAEAQRVYATHRLFHRRMSQGDVRLLPPADLAVAEMDKPGPDPLAEE-----SFEWPRYVVGSPDRVRDQLTKMADAT----------------GAEELGVVSMIHDQRDRLRSYRLLAEAFELTPR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4US5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180547 for 2395 contacts (-75.4/contact) +
2D Compatibility (PS) -30682 + (NN) 4288 + (LL) 1500
1D Compatibility (HY) -800 + (ID) 2150
Total energy: -208391.0 ( -87.01 by residue)
QMean score : 0.083
|
|
|