Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHGKAMYKGMIDCL----MKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLLMEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQ-------GSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 4MT5 Chain:A ((1-184)) | -------------------------------------------MQTAYVKYVDDTTGETLRQDDLHG-YTDETIPYS---TAEGIKKYEGD--GYVLVSDGFKPGTKF----GVGTPTYEVHFKHGMTHTDATDKNAEQKTVTETIHYVDENNQTVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTVDGNQADSKTFAAVPSPAVEG---YTPNHQQINEFTVTPDSKDIVKTVVYVGDP-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50685 for 1067 contacts (-47.5/contact) +
2D Compatibility (PS) -17554 + (NN) 4600 + (LL) 10996
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -57193.0 ( -53.60 by residue)
QMean score : -0.015
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