Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASVLSYESLVHAVAGAVGSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVLLEIIKEEGLLAPY-RGWFPVISSLCCSNFVYFYTF-NSLKALWVKGQ------HSTTGKDLVVGFVAGVVNVLLT-------TPLWVVNTRLKLQGAKFRNEDIVPTNYK---------------GIIDAFHQIIRDEGISA----------------LWNGTFPSLLLVFNPAIQFMFYEG----LKRQLLKKRMKLS-------SLDVFIIGAVAKAIATTVTYPLQTVQS----ILRFGRHRLNPENRTLGSLRNILYLLHQ--RVRRFG-----IMGLYKGLEAKLLQTVL---TAALMFLV---YEKLTAAT-FTVMGLKRAHQH |
| 4JP0 Chain:A ((2-381)) | ----LDTNKVYEISNHANGLYAATYLSLDDSGVSLMNKNDDDIDDYNLKWFLFPIDDDQYIITSYAANNCKVWNVNNDKINVSTYSSTNSIQKWQIKANGSSYVIQSDNGKVLTAGTGQALGLIRLTDESSNNPNQQWNLTSVQTIQLPQKPIIDTKLKDYPKYSGNIDNGTSPQLMGWTLVPCIMVNDPNIDKNTQIKTTPYYILKKYQYWQRAVGSNVALRPHEKKSYTYEWGTEIDQKTTIINTLGFQINIDSGMKFDIPEVGGGTDEIKTQLNEELKIEYSHETKIMEKYQEQSEIDNPTDQSMNSIGFLTITSLELYRYNGSEIRIMQIQTSDNDTYNVTSYPNHQQALLLLTNHSYEEVEEITNIPKSTLIKLKKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137395 for 2131 contacts (-64.5/contact) +
2D Compatibility (PS) -31098 + (NN) 5722 + (LL) 516
1D Compatibility (HY) -6000 + (ID) 2850
Total energy: -171105.0 ( -80.29 by residue)
QMean score : 0.089
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