Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MPVEEFVAGWISGAL------GLVLGHPFDTVKVRLQT--------QTTYRGIVDCMVKIYRHESLLGFFKGMSFPI--ASIAVVNSVLFGVYSNTLLVLTATSHQER-------RAQPPSY---MHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTE--------PRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEG-------LCRQYTPEGQNPSSATVLVAGGFAGIASWVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSS-IRQEGLGVFFRGVTINSARAFPVNAVTFLS--------YEYLLRWWG |
| 3J9T Chain:Q ((1-345)) | MEGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSESLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEA-DRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFLETGNLEDHFYQLEMELCRDAFTQQFAISTVWAWMKSKEQEVRNITWIAECIAQNQRERINNYISVY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120072 for 2032 contacts (-59.1/contact) +
2D Compatibility (PS) -28575 + (NN) 3987 + (LL) 84
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -154576.0 ( -76.07 by residue)
QMean score : 0.099
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