Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFYTLL--SAFLFSV----GSLFVKKVQDVHAVEISAF---RCVFQM----LVVIPCLIYRKTGFIGPKGQRIFLIL-----RGVLGSTA-MMLIYYAYQT-----------MSLADATVITFSSPVFTS-----IFAWIC--------LKEKYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEES------YSGHLKGTFAAIGSAVFAASTLVILRKMGKSVDYFLSIW---YYVVLGLVESVIILSVLGEWSLPYCGL-----DRLFLIFIG----LFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIF--QIIFFNNVPTWWTVGGALCVVASNVGAAIRKWYQSSK |
| 3ACP Chain:A ((1-417)) | M--TKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSR--GVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKR-ADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEIS--TSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDEVSQFCYVSDDESNGEVLEVGKNNFCALYNL---SNP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ACP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -301522 for 2691 contacts (-112.0/contact) +
2D Compatibility (PS) -37320 + (NN) 1189 + (LL) 988
1D Compatibility (HY) -7200 + (ID) 2850
Total energy: -346715.0 ( -128.84 by residue)
QMean score : 0.067
|
|
|