Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MMGSPVSHLLAGFCVWVV------LGWVGGS-------VPNLGPAEQEQNH----------YLAQLFGLYGE-NGTLTAGGLARLL--------------HSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHRPQNPELSVDVWAGMPLGPSGWGDLEESKAPHLP-----------RGPAPSGLDLLH------RLLLLDHS--------LADHLNEDCLNGSQLLV---NFGLSPAAPLTPRQ-FALLCPALLYQIDSRVCIGAPAPAPPGDL------LSALLQS--ALAVLLLS--LPSPL-----------SLLLLRLLGPRLLRPLLGFLGALAVGTLCGDA----LLHLLPHAQEGRHAGPGGLPEKDLGPGLSVLGGLFLLFVLENMLGL-LRHRGLR--------------PRC-----CRRKRRNLETRNLD-----PENGSGMALQPLQAAPEPGAQGQREKNSQHPPALAPPGHQGHSHGHQGGTDITW---MVLLGDGLHNLTDGLAI---GAAFSDGFSSGLSTTLAVFCHELPHELG----DFAMLLQSGLSFRRLLLLSLVSGALGLGGAVLGVGLSLGPVPLTPWVFGVT-------AGVFLYVALVDMLPA-------LLRPPEPLPTPHVLLQ-----GLGLLLGGGLMLAITLLEERLLPV-TTEG |
| 4NL4 Chain:H ((18-747)) | SVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQERIGIVAAVSERSELPLDELKPVAEALDDEPVFSTTVWRLLMWAAEYYHHPIGDVLFHALPVMLRQGKPASATPLWYWFATEQGQVVDLNGLKRSRKQQQALAALRQGKIWRHQVGELEFNEAALQALRGKGLAELACEATDWRSAYSVAGERLRLNTEQATAVGAIHSAADRFSAWLLAGITGSGKTEVYLSVLENVLAQGRQALVMVPEIGLTPQTIARFRQRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQI--PIILGSATPALETLHNVRQGKYRQLTLSKPAQQHVLDLKGQPLQA-GLSPALISRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDSYYTLHQAQHHLRCHHCDSQRPIPRQCPSCGSTHLVPVGIGTEQLEQALAPLFPEVPISRIDRHLAAVHRGGARILIGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRS--AERFAQLYTQVSGRAGRAGKQGEVILQTHHPEHPLLQTLLYKGYDAFAEQALAERQTMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQASPLADEKLWVLGPVPALRWQILLQHPSRVRLQHIVSGTLALINTLPEAWVLDVDPIEG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213605 for 3692 contacts (-57.9/contact) +
2D Compatibility (PS) -56091 + (NN) -15366 + (LL) 456
1D Compatibility (HY) -16800 + (ID) 5800
Total energy: -307206.0 ( -83.21 by residue)
QMean score : 0.177
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