Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MVGYDPKPDG-RNNTKFQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRSDPSAKYHGILQASRQILQEE-GPTAFWKGHVP----AQILSIGYGAVQFLSFEMLTELVHRGSVYDA------REFSVHFV----CGGLAACMATLTVHPVDVLRTRFAAQGEP-----------KVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSC----------YSSLKHLYKWAIPAEGKK---------------------NENLQ--NLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR-------------------------------------------------- |
| 2I2X Chain:A ((3-461)) | AKRYTSMAYANADEMTFGVSKYPVKAGLDLEIGAGYTIPEINYAPRPEAGASKEKLIKEYERITTDVMERMVQVGFPAIILETEHVQQMSNNPSWGAEVAHAQKTIMEKYHDEYGIKCALRHTIGDIRENREFLQLRGDKYSVFLEAFEQCAENGADLLSVESMGGKEVFDYAVLRNDIPGLLYSIGCLGSIDMELIWTDISKIAKKTGTISAGDTDCAQANTAMFIGGGL-LNKNLAHTIAVIARAISAPRSLVAYEAGAVGPGKDCGYENIIVKAITGMPMTMEGKTSTCAHSDVMGNLVMQCCDCWSNESVEYHGEFGGTTVQCWSETLAYDCALMNTALETKNDKVLRDLMMLSDRYR---DPQAYMLAYDNAYRVGQSIVKD------GDNIYLRAKNAAIECCNIIEEGAAGKLELSRFETKALADAKAALEALPDDMDKFMDDCLTKYKSEVKVFKPENYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142022 for 2395 contacts (-59.3/contact) +
2D Compatibility (PS) -32228 + (NN) -3072 + (LL) 1184
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -185138.0 ( -77.30 by residue)
QMean score : 0.248
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