Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MP-APRAPRALAAAAPASGKAKLTHPGKAILAGGLAGGIEICITFP-TEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTS-PNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQG-LEAHKYRNTWDCGLQI-LKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD- |
3RMR Chain:A ((63-311)) | WPFGPSAVEALIETIDRHGRVSLNDEAK------------------MKKVVRTWKKLIERDD-------------------------------------------LIGEIGKHYFEAPGPLHDTY------DEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGY-TSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFG----------SNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQF---PTPVFERTLAAYQYEKLSLSQIEELVEEYSRIYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14675 for 1501 contacts (-9.8/contact) +
2D Compatibility (PS) -23619 + (NN) -3859 + (LL) 4068
1D Compatibility (HY) 6800 + (ID) 1050
Total energy: -32335.0 ( -21.54 by residue)
QMean score : 0.226
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