Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMP-APRAPRALAAAAPASGKAKLTHPGKAILAGGLAGGIEICITFP-TEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTS-PNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQG-LEAHKYRNTWDCGLQI-LKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD-
3RMR Chain:A ((63-311))WPFGPSAVEALIETIDRHGRVSLNDEAK------------------MKKVVRTWKKLIERDD-------------------------------------------LIGEIGKHYFEAPGPLHDTY------DEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGY-TSDNVVSSIATGHDVDFFAPTAFTFLVKCVESEDDANNAIFEYFG----------SNPSRYFSAVLHAMEKPDADSRVLESSKKWMFQCYAQKQF---PTPVFERTLAAYQYEKLSLSQIEELVEEYSRIYS


General information:
TITO was launched using:
RESULT:

Template: 3RMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14675 for 1501 contacts (-9.8/contact) +
2D Compatibility (PS) -23619 + (NN) -3859 + (LL) 4068
1D Compatibility (HY) 6800 + (ID) 1050
Total energy: -32335.0 ( -21.54 by residue)
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_3RMR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RMR-query.scw
PDB file : Tito_Scwrl_3RMR.pdb: