Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVTGFTITDEKVHLYHSIEKEKTVRHIGDLCSSHSVKKIQVGICLLLVELCERFTFFEVVCNMIPFCTIKLGYHNCQAAILNLCFIGTSILTPVFVRWLTDVYLGRNKLVYICLFLHFLGTALLSVVAFPLEDFYLGTYHAVNNIPKTEQHRLFYVALLTICLGIGGVRAIVCPLGAFGLQEYGSQKTMSFFNWFYWLMNLNATIVFLGISYIQHSQAWALVLLIPFMSMLMAVITLHMIYYNLIYQSEKRCSLLTGVGVLVSALKTCHPQYCHLGRDVTSQLDHAKEKNGGCYSELHVEDTTFFLTLLPLFIFQLLYRMCIMQIPSGYYLQT--MNSNLNLDGFLLPIAVMNAISSLPLLILAPFLEYFSTCLFPSKRVGSFLSTCIIAGNLFAALSVMIAGFFEIHRKHFPAVEQPLSGKVLTVSSMPCFYLILQYVLLGVAETLVNPALSVISYRFVPSNVRGTSMNFLTLFNGFGCFTGALLVKLVYLISDGNWFPNTLNKGNLESFFFFLASLTLLNVLGFCSVSQRYCNLNHFNAQNIRGSNLEETLLLHEKSLKFYGSIQEFSSSIDLWETAL-- |
4B28 Chain:A ((32-468)) | ----------------RKIDPSRG-ATLGD-GSPNDMNRVEIGPTQLAFAEWHTARLDLP--DLAAMRRFRHRRLTDHVVARGYA--GLLMFDPLNIRYATDSTNMQLWNTHNPFRATLLCADGYMVMWD-----YKNSPFLSEFNPLVREQR-------------AG-----ADLFYFDRGDKVDVAADVFANEVRILLRDHAP----------GLRRLAVDKVMLHGLRALQAQGFEIMDGEEVTEKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVR----------------------RGGEWIETRLLASGPRSNPWFQECG--------PRVCQRNEIISFDTDLVGAYGICTDISRSWWIGD--QKPRADMIYAMQHGVEHIRTNMEMLKPGV-------------------MIPELSANTHVL------DAKFQKQKYGCL--------MHGVGLCDEWPLVA----YPDHAVAGAYDYPLEPGMTLCVEALIS--------------EEGGDFSIKLEDQVLITEDGYENLTKYP--------FDPALMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -371788 for 3795 contacts (-98.0/contact) +
2D Compatibility (PS) -43968 + (NN) 6548 + (LL) 13944
1D Compatibility (HY) -3200 + (ID) 2800
Total energy: -401264.0 ( -105.73 by residue)
QMean score : 0.116
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