Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MRSPVRDLARNDGEESTDRTPLLPGAPRAEAAPVCCSARYNLAILAFFG----FFIVYALRVN--LSVALVDMVDSNTTLEDNRTSKACPEHSAPIKVHHNQTG-KKYQW--------DAETQGWILGSFFYGYIITQIPGGYVASKIGGKMLLGFGIL---GTAVLTLFTPIAADLGVGPLIVLRALEGLGEG------------VTFPAMHA----------------------------MWSSWAPPLERSKLLS--ISYAGAQLGTVISLPLSGIICYYMNWTYVFYFFGTIGIFWFLL---------WIWLVSDT------------------PQKHKRISHYEKEYILSSLRNQLSSQKSVPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLL--------------PTYMKEILRFNVQENGFLSSLPYL-GSWLCMILSGQAADNLRAKW--NFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPDNTVGEWQTVFYIAAAINVFGAIFFTLFAK---GEVQNWALNDHHGHRH---------------- |
| 4WWX Chain:B ((1-618)) | APRQHLLSLTRRAQKHRLRELKIQVKEFADKEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQ-PLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSGLASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCDGMGDVSEKVPEKAVRFSFTVMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEMGGI---PRTFKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDTTRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKHPNASKEERKRWQATLDKHLRKRMNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKP-VWRSSCPAKECPESLC-QYSFNSQRFAELLSTKFK-------YRYEG---KITNYFHKTLAHVPEIIERD----GSIGAW------ASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259528 for 3187 contacts (-81.4/contact) +
2D Compatibility (PS) -48274 + (NN) -4901 + (LL) 2720
1D Compatibility (HY) -10800 + (ID) 4350
Total energy: -325133.0 ( -102.02 by residue)
QMean score : 0.139
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