Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEGTGLQPGAGEQLEAPATAEAVQERCEPETLRSKSLPVLSSASCRPSLSPTSGDANPAFGCVDSSGHQELKQGPNPLAPSPSAPSTSAGLGDCNHRVDLSKTFSVSSALAMLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVS-GYLSSVITTIERRYS-------LKSSESGLLVS-----------------CFDIGNLVVVVFVSYFGGRGRRP--------LWLAVGGLLIAFG--AALFALPHFIS-----PPYQIQELNASAPNDGLCQGGNSTATLEPPACPKDSGGNNHWVYVALFICAQILIGMGSTPIYTLGPTYLDDNVKKENSSLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKVSSMGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTCVQSRQVITPPTVGQRSQLRVVIVKTYLNENGYAVSGKCKRTCNTLIPFLVFLFI----VTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVT---SFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKEDGLQRRRQREFPLSTVSERVGHPDNARTRSCPAFSTQGEFHEETGLQKGIQCAAQTYPGPFPEAISSSADPGLEESPAALEPPS |
| 3WKX Chain:A ((1-659)) | --------------MNVTITSPFWKRRRD--QIVESVIPYQWGVMNDE---------------IDTTVPDDPAGNQLADSKSHAVANLKVAAGELDDEFH-GMVFQDSDVYKWLEEAAYALAYHPDPELKALCDRTVDLIARAQQSDGYLDTPYQIKSGVWADRPRFSLIQQSHEMYVMGHYIEAAVAYHQVTGNEQALEVAKKMADCLDANFGPEEGKIHGADGHPEIELALAKLYEETGEKRYLTLSQYLIDVRGQDPQFYAKQLKAMNGDNIFHGFYKPTYFQAAEPVRDQQTADGHAVRVGYLCTGVAHVGRLL------GDQGLIDTAKRFWKNIVTRRMYVTGAIGST---HVGESFTYDYDLPNDTMY--------------GETCASVAMSMFAQQMLDLEPK----------------GEYADVLEKELFNGS---------------------IAGISLDGKQYYYVNALETTPDGLDNPDRHHVLSHRVDWFGCACC----------------------------------PANIARLIASVDRYIYTER------------------DGGKTVLSHQFIANTAEFASGLTVEQRSNFPWDG-------------------------------HVEYTVSLPASATDSSVRFGLRIPGWSRGSYTLTVNGKPAVGSLEDGFVYLVVNAGDTLEIALELDMSVKFVRANS-----RVRSDAGQVAVMRG------PLVYCAEQVDN----------PGDLWNYRLADGVTGADAAVAFQADL-LGGVDTVDLPAVREHADEDDAPLYVDADEP------RAGEPATLRLVPYYSWANR-----EIGEMRVFQRRA------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -404736 for 5307 contacts (-76.3/contact) +
2D Compatibility (PS) -64864 + (NN) -25403 + (LL) 9852
1D Compatibility (HY) -8800 + (ID) 5200
Total energy: -499151.0 ( -94.06 by residue)
QMean score : 0.180
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