Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWG----GEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLT----KEIVTMDDEENTEEKIG-DDKINATYMWISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEAD-----SAAENEDNTDDEYINLE-FRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNY---KVQFP-- |
| 1EYS Chain:H ((7-259)) | HYIDAAQITIWAFWLFFFGLIIYLRREDKREGYPLDSPDL-------PDPKTFVLPHNGGTVVAPRVEAPVAVNATPFSPAPGSPLVPNGDPMLSGFGPAASPDRPKHCD--LTFEGLPKIVPMRVAKEFSIAEGDPDPRGMTVV--GLDGEVAGTVSDVWVDRSEP--QIRYLEVEVAANKKKVLLPIGFSRFDKKARKVKVDAIKAAHFANVPTLSNPDQVT-----LYEED--------KVCAYYAGGKLYATAERAGPLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28074 for 1337 contacts (21.0/contact) +
2D Compatibility (PS) -22933 + (NN) -7774 + (LL) 1736
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -6797.0 ( -5.08 by residue)
QMean score : 0.201
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