Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK-- |
| 1IVN Chain:A ((1-179)) | ---------------------------------------------ADTLLILGDSLSA----------------GYRMSASAAWPALLNDKWSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR------GFQPQQTEQTLRQILQDVKAA--NAEPLLM-------QIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPF---FMEEVY-LKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61442 for 1433 contacts (-42.9/contact) +
2D Compatibility (PS) -20140 + (NN) -14266 + (LL) 4616
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -97982.0 ( -68.38 by residue)
QMean score : 0.270
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