Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKLHLKYLWIVLVACTLTACMNGGGDLAGKWQLRQYQYADGTSEKVDSVFYNFQKGSFSAICLLKDGGLTTFFGNYSL-KGAEISIILLPESVNDKNYDTYFGWPEGKCTFKVEDLSYS---SLRLEYEGTKSIFRKF--
1JMX Chain:A ((282-363))
-----------------------------GKARLLAVQPA------------FIKAGGESEITLVGS-GLA---GKPDLGAGVEVTEVLEQT-------PT-------LVRLKARAAADAKPGQREVAVGTLKGVNLAVYD
General information:
TITO was launched using:
RESULT:
Template:
1JMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27362 for 544 contacts (-50.3/contact) +
2D Compatibility (PS) -7914 + (NN) 1686 + (LL) 3340
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -33200.0 ( -61.03 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_1JMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JMX-query.scw
PDB file :
Tito_Scwrl_1JMX.pdb
: