Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MDQQSTRTD----ITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSR-------DIPDNEFRVVLARRGQH-W---------VSAVRVGNDITVDDVTV-SDSASIAALVMDGLESIH----------------HADPAAINAVNVPMEEMLEATKSW----------------------QESGFNVFS----GGDLRRMGISAATV-----AALGQALSD-PAAEVAVYARQYRDDAKGPSAS-------------VLSLKDGSGGRIALYQQA-------RTAGSGEAWLAICPATPQLVQV--------------------G-VKTVLDTLPYGEWKTHSRV |
| 3WJ9 Chain:A ((3-412)) | QKSQFAYRSSKSIGLVNASENYASPPKFEAISEPARNACYSP-----------NGKLFAYATATQVVINDTES---GAKLTQLPAANTYELGFSPLGKYLSTWERPGKEADGTPKQNMKVWNTETGQLVFSFVQRNQTGWNLQYTCDESLAARLVTNEVHFYETGNMSKG-PIAKLRVEGISDFALSPGQNHAVAVFIPEKKGAPASVRTYSIPNFNSPLSQKTFFKADKVQFKWNALGTSLLVLTQDKSNKNYYGETTGQFDLDREGPIHDVCWNADSKEFGIVYGYMP-AKTAIFDNRANVVSIIPPAPRNTLIFSPNSRYILLAGFGNLQGSIDIFDAANNMKKITTVEAANCTYCEFSPDSQFLLTAVTSPRLRVDNSIKIWHITGAPMFYEEFNELYQAFWRPRPLN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WJ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -57239 for 1747 contacts (-32.8/contact) +
2D Compatibility (PS) -30110 + (NN) -3701 + (LL) 1004
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -100196.0 ( -57.35 by residue)
QMean score : 0.104
|
|
|