Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKLFSIFTLVILVFATACTNKSEKATVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNE--EKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGM-GVGKVDLD-ISGNYKNNVKVNIEGGVGEATVYLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK |
3PET Chain:A ((19-127)) | ----------------------------------------------KEFNKIDAG---TVGNIYYTQSTDGKTDLQIYGP---DNIVALIQVAVKDNTLFLSIDKSK----KVR-NFKKMKITITS--PTLNGISFK-GVGDVHIE-NGLTTDNLDIESKGVGNVDIQSL--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10058 for 744 contacts (13.5/contact) +
2D Compatibility (PS) -10711 + (NN) 3546 + (LL) 8740
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: 4533.0 ( 6.09 by residue)
QMean score : 0.161
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