Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SNINKAKV-ASVESDY--SSIKS-AALSYYS-DTNKIPVT-PD--GQTGLNVLETYM-ESLPDKADIGGEY-KLIKVGNKLVLQIGKDG-EG---VTLTEA----QSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTVMDSTK
4JGL Chain:A ((18-169))
GNAPSGYLMPAISANNFCGDFTTMTPDYGYLMPEKGLFLKMHDIRGAYGINIY-TYVMDGDNIQCTPGHFVMIVPRGGDKLEITIKKSSMKNTPSFTFIPTPDCENSAYVATEKVAGKYYYLCGDAEARYKFEDLFEDERCAEFKNLVDNYGK----
General information:
TITO was launched using:
RESULT:
Template:
4JGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10805 for 891 contacts (-12.1/contact) +
2D Compatibility (PS) -14278 + (NN) 2374 + (LL) 116
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -26993.0 ( -30.30 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_4JGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JGL-query.scw
PDB file :
Tito_Scwrl_4JGL.pdb
: