Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSFQIDGDAP--ELLKGAGEAFASVERHLLFLTWRLRGDAKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVASRGDID-PGLLANDLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPP-KPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVE-RDLPTGVCAQIEMARFSAQEREKAARRP |
| 1YNP Chain:A ((21-307)) | MKKRQLGTSDLHVSELGFGCMSLGT-DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRR-QDIILATKV-------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRRP-EEWFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYR----YDE-LKLLRESL-PTDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115765 for 2198 contacts (-52.7/contact) +
2D Compatibility (PS) -28288 + (NN) -11586 + (LL) 1844
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -164895.0 ( -75.02 by residue)
QMean score : 0.357
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