Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASWSHPQFEKGADDDDKSEPPVSMLMQVAGAVETSKGGEKWAPVTRNKFLFVGTQVRTGADGGGKLIDQNSGMAQTIGANSVVEITAAGPKAVSGSLSAPEAASGDLVAGLSNRFAEAQRYTTVRRSVKKEAADLKLRVASDITLSPTYPDLVWENMGAQYGYTLVIDGTSHAVPATSGEMVRFRVPSLTPGAHSFGVTVTEGGQAVGQTEKGGTIVWLSATEDKALVDGVARV--KAASTGDEFALGNYLDS---KGVTVAAMDAYRKHFASHKD-DNDMRPLLIKTYNDLKLRDLRQKEALVYNEQLEGNPGFSSISAHHHHHHHHHH |
| 3O48 Chain:A ((16-113)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLYPQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10823 for 620 contacts (-17.5/contact) +
2D Compatibility (PS) -9791 + (NN) -4217 + (LL) 11960
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -15771.0 ( -25.44 by residue)
QMean score : 0.131
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