Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRQPVSSSRILSIGYDPDNRMLEIQFREQGTYQYLGVPERAHQNFMSAVSKGRFFDGVIKGKFLCRKIG
2X8N Chain:A ((22-63))
-------YSTLRSVQYRSEEGVIVFILANDREL---KFRPDDLQATYGATPE------------------
General information:
TITO was launched using:
RESULT:
Template:
2X8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6962 for 218 contacts (-31.9/contact) +
2D Compatibility (PS) -4350 + (NN) -208 + (LL) 1816
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -12754.0 ( -58.50 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_2X8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X8N-query.scw
PDB file :
Tito_Scwrl_2X8N.pdb
: