Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQAT-GSAADLEKVKSLVEFILY-QRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT-S--SPVNGAFLSWQ----NLWHGYGNSQ--AYALLVAGNRLGDRDMIKAAFNELDHFHPWLISN--GLLNEFTVRQQGEKVTLIEQKKFSQIA-YIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTVNKNSGAE-S--TIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 2GZ6 Chain:A ((27-379)) | -----------------------------------HSLDSE-GGYFTC-LDRQG--KVYDTDK---FIWLQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLV--QPY---NIFSDCFAAMAFSQYALAS--GEEWAKDVAMQAYNNVLRR---------------------TRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYF-MDAAGHPPQQ---LEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQ------HFADPEYGEWFGYLN-RRGEVLLN-LKGGKWKGCFHVPRAMYL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141247 for 2631 contacts (-53.7/contact) +
2D Compatibility (PS) -33991 + (NN) -12476 + (LL) 7688
1D Compatibility (HY) -400 + (ID) 1800
Total energy: -182226.0 ( -69.26 by residue)
QMean score : 0.346
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