Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKP--------IYIESMLQEMGPR-----QTQMFIRST----S------NGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
1MHQ Chain:A ((59-161))
-GPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPE--DIKIRDAYQMLKKQGII---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1MHQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19516 for 446 contacts (-43.8/contact) +
2D Compatibility (PS) -8675 + (NN) -5691 + (LL) 3304
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -33828.0 ( -75.85 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_1MHQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MHQ-query.scw
PDB file :
Tito_Scwrl_1MHQ.pdb
: