Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------MKKVLLLVFLSLTWLS--------ASAQALVPITWTAYGLTFEAP---------KGILVEEDTEETFLLN--NSRFYITIQSLDSDGMT---------------KSDLKSVLKDYANDDGV--KDQSAVQEF--ELPQFFGTYLKGSCETDHCLYAC--LMTKAA--GSGFYISIIYSKEN-ENIAEKILKSFTMEE |
| 1JR2 Chain:A ((1-260)) | MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLV-----SKIGLDTEGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNID------QIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIRKALQ--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1JR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39668 for 712 contacts (-55.7/contact) +
2D Compatibility (PS) -15043 + (NN) -5276 + (LL) 816
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -63321.0 ( -88.93 by residue)
QMean score : 0.300
|
|
|