Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePYLKEKSSATVYFQTVKHNNIRDLVRRCITRTSQVLVILMDVFTDVEIFCDILEAANKRGVFVCVLLDQGGVKL--FQEMCDKVQISDSHLKNISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFVLSGSYSFTWLCGHVHRNILSKF-TGQAVELFDEEFRHLYASSKPVMGLKSP
4GGJ Chain:A ((44-180))-----------------SESSLSRLLRALLAARSSLELCLFAFSSPQLGRAVQLLH-QRGVRVRVITDCDYM--GSQIGLLRK--------AGIQVRHDQD-----------LGYMHHKFAIVDKKVLITGSLNWTTQAIQNNRENVLIMEDTEYVRLFLEEFERIWEEFDPT------


General information:
TITO was launched using:
RESULT:

Template: 4GGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121133 for 981 contacts (-123.5/contact) +
2D Compatibility (PS) -14772 + (NN) -10674 + (LL) 2976
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -149403.0 ( -152.30 by residue)
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_4GGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GGJ-query.scw
PDB file : Tito_Scwrl_4GGJ.pdb: