Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQY--------------KGIVDCIVRIPKEQGVLSFWR------GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKH----TQFWRYFAGNLASGGAAGAT----SLCFVYPLDFARTRLA------ADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVR-----------------------RRMMMQSGRKGADIMYTGTVDCWRKIFRDEG------GKAFFKGAWSNVLRGM--GGAFVLVLYDELKKVI-------- |
| 1WKV Chain:A ((2-383)) | ALADISGYLDVLDSVRGFSYLENAREVLRSGEARCLGN-PRSEPEYVKALYVIGASRIPVGDGCSHTLEELGVFDISVPGEMVFPSPLDFFERGKPTPLVRSRLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVNQ-FYNDANFEAHMRGTAREIFVQSRR--GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGIRRVETGMLWINMLDISYTLAEVTLEEAMEAVVEVARSDGLVIGPSGGAAVKALAKKAAEGDLEPGDYVVVVPDTGFKYLSLVQNALE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150937 for 2419 contacts (-62.4/contact) +
2D Compatibility (PS) -29992 + (NN) 2993 + (LL) 264
1D Compatibility (HY) -4000 + (ID) 2050
Total energy: -183722.0 ( -75.95 by residue)
QMean score : 0.232
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