Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MAAATAAAALAAAD-----PPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAP--LDRVKVLL--QAHNHHYKHLGVFSALRA-------VPQKEGFLGLYKGNGAMMIRIFPY----------GAIQFMAFEHYKTLITTK---------------LGISGHVHRLMAGSMAGMTAVICTYPLDMV----------------RVRLA----FQVKGEHSYTGIIHAFKTIYAKEGGF---FGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLL-----------------------GRPSSDNPNVLVLKTHVNLLCG-----GVAGAIAQTISYPFDVTRR------RMQLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN--------------------- |
| 4NNB Chain:A ((4-527)) | TSLYITAAPIGAVPKFLDPFEATFIPSFLLEGFFDADRCASIAADLKTDGWEVVPAGGRLLQVGHAQPIAHFPKPWLAALSNKLARRIVLQLTTYGWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAGWIACAAGYWQAGKARSPYLPITPEAITEETIRSMRAGAAVVHLHTRDLSDRRRIEIPGLGVVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTGKPVLFMLVAGVDQYRRDPITGEVEDDSLIARVVREEISSLLADESADSHRRAVELAIGQLRPVVERLRASFPVSKISILLPGPMQNLLVDVALGL--GLDGIRVGLEDGLTVNDARVPGGVRKARGTWEQVSLVREELLGRGATILTAAQVRDMFGLGI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -115545 for 2210 contacts (-52.3/contact) +
2D Compatibility (PS) -34009 + (NN) -4387 + (LL) 284
1D Compatibility (HY) -4400 + (ID) 2800
Total energy: -160857.0 ( -72.79 by residue)
QMean score : 0.113
|
|
|