Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICLWLVVFPVDCIKSRIQVLSMYGKQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY- |
| 2DVY Chain:A ((1-223)) | MIHLTSVEASVSFENGK---------------IVVRLP------------ITRPTSKIRVKKIENGVGIPVSTR--------------KKSFPSDENLRDYYIEWQISYARDGKYDYELSRMVRLAHEHGILTYNDIYELLKFADDVKSY-----------LEDKGI-----RRESTNEELYGFNIYEDVYPVAKKELPSG---EFIGIVLKHKQRAVGYQSMVYVCIPLTNVEP-----SLAGRVARRNEVVKYEVPVDLMKELLKAFI--------------IASETHKNDIVKFLRSII |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98359 for 1595 contacts (-61.7/contact) +
2D Compatibility (PS) -23082 + (NN) -1641 + (LL) 5000
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -128182.0 ( -80.36 by residue)
QMean score : ?
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