Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASVLSY-------------ESLVHAVAGAV------GSVTAMTV--FFPLDTARL-----RLQVDEKRKSKTTHMVLLEIIKEEGLLAPYRGWFPVISSLCCSNFVYFYTFNSLK----------------ALWVKGQHSTT------GKDLVVGFVAGVVNVLLTTP------------LWVVNT----RLKLQGAKFRNEDI---VPTNYKGIIDAFHQIIRDEGISALWNGTFPSLLLVFNPAIQFMFYEGLKRQLLKKRMKLS-----SLDVFI---------IGAVAKAIATTVTYPLQTVQSILRFGRHRLNPE--NRTLGSLRNILYLLHQRVRR------------FGIMGLYKGLEAKLL---QTVLTAALMFLVYEKLTAATFTVMGLKRAHQH------------------------ |
4XR7 Chain:B ((1-456)) | MHSLLQYRSADQLFIPNNIREDLTKKNLSILQVFPSSGKVIPSIVQDYFNLVPLNFNNKTTLFKVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQTTKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVLITGDPGRIKLSHCNFMDLLFNDDTDTVVSSTIEGQQQLDYKYLGELLFNLSINIENSNNNTAPKEYRLEEITPQSIDDMRQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSITQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112432 for 1699 contacts (-66.2/contact) +
2D Compatibility (PS) -30956 + (NN) 5608 + (LL) 0
1D Compatibility (HY) -19600 + (ID) 2900
Total energy: -160280.0 ( -94.34 by residue)
QMean score : 0.128
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