Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------MSSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDSDRIEPKAVKALKASAEFQLNSEK--KEHLSLQDLSDH---------ASSADHAPTDQSPAMPMQNSSEEITVAGN-LEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEP-------QMF-LGEKD------WHPENQNLSQVSDPQQHEEPGNEQYEVAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLP---QNVDPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTG--------RQNANVKNIGALDLTLDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQPSVESAEESCPS-ITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERWTQNEHLTQNEQCPQV--SFHQAIS----------------VSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKEGVPKSRESINKNRSVTVTSAKTSNQLHCTLGVEISPK----------LLAGEEDALNQTSEQTKSLSSNFILVKDLGQGIQN------SVTDRPETRE----------NVCPDASRPLLEYEPPT-----SHPSSSPAILPPLIFP-ATDIDRILRAGFTLQEALGALHRVGGNAD-LALLVLLAKNIVVPT-------- |
| 4J5T Chain:A ((1-811)) | AEFMEEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFATPQDKLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPSTASVVLYFSQNGGEIDGKSSLAMIGHDG-PNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYETMEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILERPADLIPSVLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTE--LITWSLNEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTEIKLLNAKEE------GPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREIILGNEARSKVPQEFQVQNPNIAN--PPTLLLAFSEMLSRAIENIGDFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAHVLK-------LTQDEQRYAQIEQEVVENLDLLHWS--ENDNCYCDISIDPEDDEIREFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNILGRFRSHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 161048 for 4344 contacts (37.1/contact) +
2D Compatibility (PS) -60675 + (NN) 2929 + (LL) 720
1D Compatibility (HY) -21600 + (ID) 4400
Total energy: 78022.0 ( 17.96 by residue)
QMean score : 0.067
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