Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHCRPPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGATEPCTDGWIYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGA----MVFGYLADRLGRRKVLILNYLQTAVSGTCAAF-APNFPIYCAFRL-LSGMALAGI-SLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYAVPHWRHLQLLVSAPFFAFFIYSWFFIESARWHSSSGRLDLTLRALQRVA--RING-------KREEGAKLSMEVLRASLQKELTMGKGQASAMELLRCPTLRHLFLCLSMLWFATSFAYYGLVM---DLQGFGVSIYLIQVIFGAVDLPAKLVGFLVINSLGRRPAQMAALLLAGICILLNGVIP-QDQSIVRTSLAVLGKGCL---AASFNCIFLYTGELYPTMIRQTGMGMGSTMARVGSIVSPLVSMTAELYPSMPLFIYGAVPVAASAVTVLLPETLGQPLPDTVQDLESRWAPTQKEAGIYPRKGKQTRQQQEHQKYMVPLQASAQEKNGL------ |
| 1II2 Chain:A ((1-522)) | -------------------------PP-TIHRNLLSPELVQWALK-----IEKDSRLTARGALAVMSYAKTGRSPLDKRIVDTDDVRENVDWG------K-----------VNMKLSEESFARVRKIAKEFLDTR--EHLFVVDCFAGHDERYRLKVRVFTTRPYHALFMRDMLIVPTPEELATFGEPDYVIYNAGECKAD-PSIPGLTSTTCVALN---FKTREQVILGT--EYAGEMKKGILTVMFELMPQMNHLCMHASANVGKQGDVTVFF-----GLSGTGKTTLSADPHRNLIGDDEHVWTDRGVFNIEGGCYAKAIGLNPKTEKDIYDAVRFGAVAENCVLDKRTGEIDFYDESICKNTRVAYPLSHIEGAL-SKAIAGHPKNVIFLTNDAFGVMPPVARLT-----SAQAMFWFVMGYTANVPGVEAGGTRTARPIFSSCFGGPFLVRHATFYGEQLAEKMQKHNSRVWLLNTGYAGGRADRGAKRMPLRVTRAIIDAIHDGTLDRTEYEEYPGWGLHIPKYV-AKVPEHLLNPRKAWKDVRQFNETSKELVAMFQESFS-ARFAAKAS-QEMKSAVPRYVEFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1II2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -330992 for 4431 contacts (-74.7/contact) +
2D Compatibility (PS) -51092 + (NN) -1319 + (LL) 5248
1D Compatibility (HY) 1200 + (ID) 3400
Total energy: -380355.0 ( -85.84 by residue)
QMean score : 0.232
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