Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MAFSKLLEQAGG----VGLFQTLQV----LTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNGSA----VSTNMTP---KALLTISIPPGPNQGP-----------HQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFM--SGILVGSFIWGLLSYRFGRKPMLSW----CCLQL---AVAGTSTIFAPT------------------FVIYCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRR-AVTMTVVGCAFSAGQAALGGLAFALRDWRTLQLAASVPFFAISLISWWLPESAR---------WLIIKGKPDQALQELRKVARINGHK-EAKNLTIEVLMS--------------SVKEEVASAKEPRSVLDLFCVPVLR----WRSCAMLVVNFSLLISYYGLVFDLQSLGRDIFLLQALFGAVDFLGR--------ATTALLLSFLGRRTIQAGSQAMAGLAILANMLVPQDL---------QTLRVVFAVLGKGCFGISLTCLT--------IYKAEL-------------FPTPVRMTADGILHTVGRLGAMMGPLILMSRQALPLLPP----LLYGVISIASSLVVLFFLPETQGLPLPDTIQDLESQKSTAAQGNRQEAVTVESTSL |
| 4AEE Chain:A ((1-696)) | MYKIIGREIYGKGRKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKCVHTSFFPEYKKCLSKLVIKEPDNPLDKIIHIEESGFIHKFNGEIIIRLIAPTEINEPLIDLGNEIREPLTKHVVGDNIVYQYIIPSRSILRYRFIFNYNDKKLFYGDEGVSENSSYIVVNSKYIPGVDKPRWYMGTVYYQIFIDSFDNGDPNNDPPNRIKKTVPREYGYYGGDLAGIMKHIDHLEDLGVETIYL---TPIFSSTSYHRYDTIDYKSIDKYLG-TMEDFEKLVQVLHS-RKIKIVLDITMHHTNPCNELFVKALREGENSPYWEMFSFLSPP-PKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWIDKGIDGFRIDVAMGIHYSWMKQYYEYIKNTYP---DFLVLGELAENPRIYMDYFDSAMNYYLRKAILELLIYKRIDLNEFISRINNVYAYIPHYKALSLYNMLGSHDVPRIKSMVQNNKLLKLMYVLIFALPGSPVIYYGDEIGLEGGRDPDNRRPMIWDRGNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSNLLFIKRWINNEEIIFLLNVSSKDISVDLKYSFDIYNEKNVLLRGYGFLILGSKPCNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -357631 for 3912 contacts (-91.4/contact) +
2D Compatibility (PS) -55763 + (NN) 6637 + (LL) 448
1D Compatibility (HY) -26800 + (ID) 3300
Total energy: -436409.0 ( -111.56 by residue)
QMean score : 0.132
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