Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MPVEEFVAGWISG---ALGLVLGHPFDTVKVRLQTQTTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYF--ITYEGL--CRQYTPEGQNPSSATVLVAGGFAGIAS------------------WVAATPLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG-- |
| 1LVO Chain:A ((1-299)) | SGLRKMAQPSGLVEPCIVRVSYGNNVLNGLWLG---DEVICPRHVIASDTT------RVINYENEMSSVRLHNFSVSKNNVFLGVVSARYKGVNLVLKVN--QVNPNTPEHKFKSIKAGESFNILACYEGCPGSVYGVNMRSQGTIKGSFIAG--------TCGSVGYVLENGILYFVYMHHLELGNGSHVGSNFEGEMYGGYEDQPSMQLEGTNVMSSDNVVAFLYAALINGERWFVTNTSMSLESYNTWAKTNSFTELSSTDAFSMLAAKTGQSVEK-LLDSIVRLNKG--FGGRTILSYGSLCDE----FTPTEVIRQMYGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152782 for 2047 contacts (-74.6/contact) +
2D Compatibility (PS) -27690 + (NN) -4564 + (LL) 1640
1D Compatibility (HY) -10000 + (ID) 2800
Total energy: -196196.0 ( -95.85 by residue)
QMean score : 0.266
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