Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MRPQDSTGVAELQEPGLPLTDDAPPGAT------------EEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPG---LGLFYTLLSAF--LFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIP-------CLIYRK---TGFIGPKGQRIFLILRGVLGS----TAMMLIYY----------AYQTMSLADATVITFSSPVFT----SIFAWICLKEKY---------------SPWDALFTVFTITGVILIVRPP----FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAAS---TLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQ--------IFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFN--NVPTWWTVGGALCVVASNVG-------AAIRKWYQSSK- |
| 4HU8 Chain:A ((3-452)) | NEITLTIGQQKDLASMVPAKFAGQELSWTSSDPETASVTDKGIVTALKFSSGGANLFLKAPATGEAIITVTA---GKQSHSVKVITTVKGKEDIEKLPPLKDHFKDYFLIGNIF--NNRDVSGSMMDNDWLAHHYAILTPENHMKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQQIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEIFPDGRGDNWTTAMRPENPWFKSIGSDFVYEAYLAARQADPNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGV----KISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYSWRSGGLPLLFDADNKAKPAYYSFVRAREDYEAAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283793 for 2723 contacts (-104.2/contact) +
2D Compatibility (PS) -34821 + (NN) 17375 + (LL) 492
1D Compatibility (HY) -5600 + (ID) 3050
Total energy: -309397.0 ( -113.62 by residue)
QMean score : 0.112
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