Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MMGSPVSHLLAGFCVWVVLGWVGGSVPNLGPAEQEQNHYLAQLFGLYGENGTLTAGG---------LARLLH-SLGLGRVQGLR----------------LGQHGPLT-GRAASPAADNSTHRP------------QNPELSVDVWAGMPLG-PSGW------GDLEESKAPHLPRGPAPSGLDLLHRLLLLDHS-LADHLNE-DCLNGSQLLVNFGLSPAAPLTPRQFALLCPAL-----------------------LYQIDSRVCIGAPAPA---------------PPGDLLSALLQSALAVLLLSLPSPLSLLLLRLL-------GPRLLRP------LLGFLGALAVG--------TLCGDALL---HLLPH-AQEGRHAG-PGGLPEKDL-GPGLS-------VLGGLFLLFVLE--------------NMLGLLRHR----GLRPR--------------------CCRRKRRNLETRNLDPE-NGSGMALQPLQAAPEPGAQGQRE---KNSQHPP----------ALAPPGHQGHSHGHQGG-TDITWMVLLGDGLHNLTDGLAIGAAFSDGFSSGLSTTLAVFCHELPHELG--DFAMLLQ-----SGLSFRRLLLLSLVS---------GALGLGGAVLGVGLS-LGPVPLT-----PW-VFGVTAGVFLY-----VALV-DMLPALLRPPEPLPTPHVLLQGLGLLLGGGLMLAITLLEERLLPVTTEG--- |
| 4O5P Chain:A ((5-815)) | NFGFHIAPTHPVAGRLTYDSKKLSENILKQQSDERVFSRAQCCKAIHITLGFDGTNNNDKADGSSVSPSCSNVARLIHASIGSGDDINSRGIFKYYCPGVGTVFPDIKEFTPSNMGLIGAEGGENRINWGLVQLVDALFYTLLKSRLKLNDVQGLVEEMSTNWTVSTLTGGLLENGEKKRRAALEPKLKELEEKLRQRQNSGQKPHILAMR-------LYIYGFSRGA-AEARAFANWLQELTRVSDADGRVEYRFAGLPISIEFLGLFDTVAAVGLPFAAGHMDWADDTMRLPDEALPEDCSFLKRCVHLVSCHEQRASFPLDSIRRRDMNGRRTGPSCYRKWTVEYAYPGVHSDVGGGYGVGNQGKAVGGSEFLLSQIALQHMYAEAFEAGAPLQVPEWRVMVPKIEAEFSVSEELATRFNAWQAQAKAGPLEEVIRRETALITAWRIDRYAGGLRNKAFFANVPPDMPEAQQKAWEALHKRRSREYAAAQQLPPMSAAEQAEWDRNVALIGGEDQLRDLRVEKQFDPPLDQRQLLGAAAEFAHDYKGDWGVLDDGMTVGGVIDLLLGGTVFLINEEDEAEEYSQIHRDGSARYHQLFSAPDRVAPGQEKLVALFDEQVHDSRAPFTDYFRYRLVHFDNESNKRLSVLATAGRVVGVGV-MLASVGLSVKRRDPRMLLGGLPEISAFDPLTGIALPMVGGAALDNLRAFTREPGDKVEQIGQLPPPPPLAVAAVQSPALQQVLLAQQTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188028 for 3599 contacts (-52.2/contact) +
2D Compatibility (PS) -54932 + (NN) -6115 + (LL) 80
1D Compatibility (HY) -2400 + (ID) 5800
Total energy: -257195.0 ( -71.46 by residue)
QMean score : 0.079
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