Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MCFRT--KLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPADLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQ-GDCNLCFEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQD-EDSSFLSQNETEDILAFTRQYFDTSQSQCME--TKTLQKKSGIVS---SEGANESTLPQLAA-------MIITLSLQGVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSE----LDQLLNTLWTRSTCIKNEKIHQFQRKQNNIITHDQDYSNFSS-----------SMEKESEDGPVSWDQTCFSARQ---LVEIFLQKGLSLISK---EDFKQMSPGIIQQLLSCS------CHLPKDQQA---KLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHSCEENYRLILQLFVGLAVGTLSGDAL------------LHLIPQVLGLHKQEAPEFGHFHESKGHIWKLMGLIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGRGKSASTIQLKSPEDSQAAEMP--IGSMTAS-----NRKCKAISLLAIMILVGDSLHNFADGLAIGAAFSSSSES----------------------GVTTTIAILCHEIPHEMGDFAVLLSSGLSM---------KTAILMNFISSLTAFMGLYIGLSVSADPCVQDWIFTV------TAGMFLYLSLVEMLPE-------MTHVQTQRPWMMFLLQNFGLILGWL----SLLLLAIYEQNIKI------ |
| 3W3W Chain:A ((3-1077)) | ALPEEVNRTLLQIVQAFASDNQIRSVAEKALSEEWITENNIEYLLTFLAEQAAFSQDTTVAALSAVLFRKLALKAPITHIRKEVLAQIRSSLLKGFLSERADSIRHKLSDAIAECVQDDLPAWPELLQALIESLKSGNPNFRESSFRILTTVPYLITAVDINSILPIFQSGFTDASDNVKIAAVTAFVGYFKQLPKSEWSKLGILLPSLLNSLPRFLDDGKDDALASVFESLIELVELAPKLFKDMFDQIIQFTDMVIKNKDLEPPARTTALELLTVFSENAPQMCKSNQNYGQTLVMVTLIMMTEVSIDDDDAAEWIESDDTD--DEEEVTYDHARQALDRVALKLGGEYLAAPLFQYLQQMITSTEWRERFAAMMALSSAAEGCADVLIGEIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFSPFIQRTAHDRILPALISKLTSECTSRVQTHAAAALVNFSEFASKDILEPYLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLLLNVLKVNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDALRSYLEQSWSRICRILGDDFVPLLPIVIPPLLITAKATQDVGLIEEEEAANFQQYPDWDVVQVQGKHIAIHTSVLDDKV-SAMELLQSYATLLRGQFAVYVKEVMEEIALPSLDFYLHDGVRAAGATLIPILLSCLLAAEELVLLWHKASS---KLIGGLMSEPMPEITQVYHNSLVNGIKVMGDNCLSEDQLAAFTKGVSANLTDTYERMQDRDEYNEDFTDEDLLDEINKSIAAVLKTTNGHYLKNLENIWPMINTFLLEPILVIFALVVIGDLIQYEQTASMKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAPSTYADVCIPTLDTLVQIVDGSKLEENRSSTENASAAIAKILYAYN--SNIPDTYTANWFKTLPTITDKEAASFNYQFLSQVCAQSNISAVVDSVIQALNERSLTVISSVKKLLGFLPSSDAMAIFNRYPADIMEKVHKWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186994 for 5175 contacts (-36.1/contact) +
2D Compatibility (PS) -69637 + (NN) -18638 + (LL) 616
1D Compatibility (HY) -24000 + (ID) 5600
Total energy: -304253.0 ( -58.79 by residue)
QMean score : 0.185
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