Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MGGLTASDVHPTL--GVQLFS---AGIAACLADVITFPL----DTAKVRLQVQGECPTSS-VIRYKGVL-------GTITAVVKT--EGRMKLYSGLP-AG-------LQRQISSASLRIG-LYD---TVQEFLT-AGKETA--PSLGSKILAG------LTTGGVAVF-----------------IGQPTEVV---KVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGL----WKGTT-----PNLMRS------VIINCTELVTYDLMKEAFVKNNILADDV-------PCHLV-SALIAGFCATAMSSP-------VDVVKTRFINSPPGQYKSV-PNCAMK---VFTNEGPTAFFKGLVPSFLRLGS---WNVIMFVCFEQLKRE----------LSKSRQTMDCAT------ |
| 4OO3 Chain:A ((3-441)) | EGFTGAPGEVKLITLDPGHFHAALVQKVSYPQVSKDVYVYAPTGFDVDEHLKRIQGFNTRAENPTAWNEIVYTGDDYLEKMLAEKKGNVMIQAGNNGKKTEYIKKTLEAGINVLSDKPMAINSQSFKLLEECFAIAKQKNIMLYDIMTERNEITTMLQRELSTIPAVYGEQLKGSPEEPAIVKESVHHLFKLVDNKPLTRPVWYLDVNQQGEGIVDVTTHLVDLVQWEAFPDQIIDYRKDIELIDANRWTTSISPEEFKQVTGTDAYPDFLKKDVENDTLKVYCNGDIVYKI-KGVTAKVSVIWNYTFPKGGGDTHFSVMKGSKADLVIRQGKEQNYQPELFVEAVKGVDLAAYEKDLTASMEKVSAEYPGVALNKVGDGVWQVEIPAKYRVGHEAHFGQVTEHFLDYLKEGKLPDWEVPNMLAKYYTTTSALDMAKAKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85568 for 2071 contacts (-41.3/contact) +
2D Compatibility (PS) -31812 + (NN) -648 + (LL) 208
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -130220.0 ( -62.88 by residue)
QMean score : 0.012
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