Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK
1LM7 Chain:A ((2339-2400))
------------YNDPETGNIISLFQAMNKELIEKGHGIRLLEAQ-----I-ATG------GIIDPKESHRLPVDIAYKRGYFNEE-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1LM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3430 for 369 contacts (-9.3/contact) +
2D Compatibility (PS) -6880 + (NN) -5361 + (LL) 2512
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -16259.0 ( -44.06 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_1LM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LM7-query.scw
PDB file :
Tito_Scwrl_1LM7.pdb
: