Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------MALSLCVLFTLASVVSGHVA-HPSLGRGDGFPFLWDNAASTLDQLNGTDTTIILNGFNYLDRLSMFKTVLEGTRKYFDSFAPNN---TANIYW--GFTIYLNWILATGRSADPTGHTTCGLAHGDP----MCLAEESWWNCIKYNPAAIAFFAAKKAG----IFGDVTKTIVLAK----PKEANSPYCSSEEECQ--------------------------------AAYPDVMA---------TYLDY-----------------------------FEYLMSL-----EKTGESIDM-DKAQQLLWKAHVTS------------------MENSIAVCKPRLKNYNIIERQLDRDYLISLLYFAATNFPTNFIESIKFVADMPH--RQLRFGDIAPFIPDMDMKKNNLLVVLHGFY---------TVHSLSGGSSLTH-WRNLME----SPVSREMARDMVNLILAGTPV--EVQVELAKLGIPTPVDYKDDDK----------- |
| 2BVL Chain:A ((1-543)) | MSLVNRKQLEKMANVRFRTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDICIDTYKKSGRNKALKKFKEYLVTEVLELKNNNLTPVEKNLHFV---WIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDELNTYIEESLNKITQNSGNDVRNFGEFKNGESFNLYEQELVERWNLAAASDILRISALKEIGGMYLDVDMLPGIQPDLFESIEKPSSVTVDFWEMTKLEAIMKYKEYIPEYTSEHFDMLDEEVQSSFESVLASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVK--DSYCSNLIVKQIENRYKILNNSLNPAISEDNDFNTTTNTFIDSIMAEANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKRNYFEGAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114951 for 2443 contacts (-47.1/contact) +
2D Compatibility (PS) -36810 + (NN) 2477 + (LL) 300
1D Compatibility (HY) -15600 + (ID) 3100
Total energy: -167684.0 ( -68.64 by residue)
QMean score : 0.070
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