Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPF-NAPP-VVGTELDYMQSAMGSGKLC------GDGGFTRRCQQWLEQRFGSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRPDTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNR----SQFFRGQVDKYTWR-DIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGRIELPSIPDGCV-QNAHMFYIKLRD----IDDRSALINFLKEA-EI---MAVFHYIPLHGCPAGEHFG--EFH------------GEDRYTTKESERLLRLPLFYNL-SPVNQRTVIATLLNYFS |
| 2C81 Chain:A ((8-411)) | ----WPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPVHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLT-AGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSKI--DG-IKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C81.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248421 for 3254 contacts (-76.3/contact) +
2D Compatibility (PS) -40813 + (NN) -22632 + (LL) 828
1D Compatibility (HY) -19600 + (ID) 5300
Total energy: -335938.0 ( -103.24 by residue)
QMean score : 0.528
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