Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLLCLLALLLCTTVFAQPQQVVVGVSGNGYVTRQQDGARITQRGVTHWTNPKSIVSIYFYLHQPTTADLSLYAK-G---HSEIKVSYGKKGF-KVNLQSND----FTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQKIKLLRQGKDVHIGEFGNEGSGGQSYLKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGKEPEIDWEALKQL |
| 2W3J Chain:A ((33-130)) | ------------------------------------------------TENAVGASIVWSLSAASAKTYTAQIRFGNGGTSARRATVVVNDSQIKTLDFPTNSNWTQWQTV-NVDIPLK-AGTNSIKLVAETA--DGLANIDSIRVTGNG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50054 for 604 contacts (-82.9/contact) +
2D Compatibility (PS) -9676 + (NN) -2695 + (LL) 16176
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -48449.0 ( -80.21 by residue)
QMean score : 0.110
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